CDS

Accession Number TCMCG017C28412
gbkey CDS
Protein Id OMO65754.1
Location complement(join(39979..41793,41872..42233,42823..42946,43228..43474,44388..44443))
GeneID InterPro:IPR012935
Organism Corchorus olitorius
locus_tag COLO4_31017

Protein

Length 867aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01020810.1
Definition Zinc finger, C3HC-like protein [Corchorus olitorius]
Locus_tag COLO4_31017

EGGNOG-MAPPER Annotation

COG_category G
Description atilp1,ilp1
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009968        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010648        [VIEW IN EMBL-EBI]
GO:0010941        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019900        [VIEW IN EMBL-EBI]
GO:0019901        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023057        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031965        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0042981        [VIEW IN EMBL-EBI]
GO:0043066        [VIEW IN EMBL-EBI]
GO:0043067        [VIEW IN EMBL-EBI]
GO:0043069        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0060548        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:1901099        [VIEW IN EMBL-EBI]
GO:2001233        [VIEW IN EMBL-EBI]
GO:2001234        [VIEW IN EMBL-EBI]
GO:2001236        [VIEW IN EMBL-EBI]
GO:2001237        [VIEW IN EMBL-EBI]
GO:2001239        [VIEW IN EMBL-EBI]
GO:2001240        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGAGAAGAGGTTATTAGCTCTGGTGGGACCATAGATCCCACTCCGGCTGCGAGTTCTGCTGGGGCATCTTCACCTGCTGTTCCAAATGTTGGCAGTATAGATTGGTCTGGTCATGGACAAAATTCCAAAGCAGTTTCTCAATCCTGTGTTGGATCCCAAGCACCATGGACTTCACTCAGTACTAGTGCTGGAGGATCTGCTCTTGGATCATCAAAAACTTCATGCCGACCATGGGAAAGAGGGGATCTTCTTAGGCGTTTGGCTACATTTAAGCCAATGAATTGGTTTGGGAAACCTAAGTTGGCTAGCTCATTGGCATGTGCTCAGAGAGGTTGGATGAACATAGATGTTGATAAAATTGCATGTGAGACATGTGGGGCATGCCTGCATTTTGCTTCCTCTCCGTCCTGGCCTGCTTCTGAAGGGAAAATTGTTTCTGAAGCTGAGGATGCTGGTCTGGTCTTTTCCAAGCAGTTGGATGTTGGCCACAAAGTTGCTTGTCCATGGAGAGGAAACAGCTGTCCAGAAAGCTTGGTCCAATTCCCTCCAACACCTCAGTCTGCCCTAATTGCAGGATACAAGGATAGATGCGATGGACTCTTGCAGTTTCAGTCCCTTCCTGTCATAGCTGCATCTGCATTGGAGCATATGCGAGTGTCTCGTGGTCCACAGGTTGATCGCCTTCTGTCTCAGCTGCAGAATTATATGACAGAGTTTGAATCAAGATCAGAGAATATACCCGAATTTGATAACCCTAGAGATGGTGCATTTTGTCTATATTATCGTTCACAAAAGCTCATAAGCTTGTGTGGATGGGAACCAAGATGGCTTCCAAATATTCAAGACTGTGAAGAACATTCTGCTCAATCAGCGAGAAATGGATGTTCTTTTGGCCCTAGTACAGCCCAGCTCCATCTTTCTCAAGATCCTGGACCAAGCAAAAATGCGCTGGCTGCTTCAGCCAAGGACACTGGAAAAAATAAGTTGTTAGTTGTGGAGTCTAGATCTGAACTCAGGTCACCTTTATTAGATTGTAGCCTATGCGGTGCTACTGTCAGGATATTGGATTTTTTAACTGTTCCTCGACCTGCTCGTGTTGGTCCCAACAACATTGACATCCCTGATACAAGCAAAAAAATGGGATTGACACGTGGAGTAAGTGCAGCTAGTGGAATTAGTGGTTGGGTTGCTGCTGATGATCCAGATAAAGAGACTGAAGACCGTGATGAAGTAGGAACAAACGACGAAAGAAAATTAATGCAAAAATCAGATGTTGATTTGAATCTTACAATGGCCGGGGGTCTCTCTGTTAACCAGTTGGGTAGACCCACAACATCCAGAAATATGAATGATGCAGACATGGGACGGGATCTAATGATTGGGCAACCGGCAGGTAGTGAGGTTGGTGATCGAGCAGCCTCTTATGAATCAAGGGGTCCTAGTTCTCGCAAGCGAAGCTTGGAAATAGGTGCCAGTTCAGATGACAGGCCACAGTTACGATTGCAGCAGGCTGATAGTGTCGAAGGAACTGTCATTGATCGTGATGGTGATGAAGTCACTGATGGCAGACAATATTCTGCTGGGCCTTCCAAACGCGCTCGTGATTCAGATATTTTTGATACTAATTGCTCATATCCAAGAGACTCATCTGATGCAGGTCCAAGCCATTCAATGGGTTTTGAAACTCATGCAGATGGGAATAGATTTGCTCTGTTTAGGCAAGGAAGTGACCATGTTTTCGGAAACCCATCAGCTAGAGATTCAACACGTGCATCCTCTGTCATTGCTATGGATACTGTGTGCCACAGTGCAGATGATGACTCAATGGAAAGTGTTGAAAATTATCCTGGAGATGTTGATGATATCCATTTTCCCTCCTCAAGTACATATGGCCACCTTGACATGAATGACACATCAGAGTTGAATAATAGTAATCAAGCTCAGCAGAGTATTTGTTTCCAACCAGCTGCTGAAGCACTTCCGGGAGAAATGGGCATCAGCAGTACAAATGATGGTGAAGAAATTTTCAATGCTGAAACTGTGACAGCTCAGGCTAGGGATGGGCTCAGTTTTGGAATTAGTGGTGGGAGTGTTGGCATGTGTGCCAGCCATGAAGCCGAAATCCATGGGGCAGATGTATCTGTGCACAGAACAGATAGTGTAGTTGGTGATGTGGAACCCAGAATAGAAGATGCTGAAAATCAGGGTCAAACAGGTGAATCTGCTCCAGATCCTGGGTTGATGGATGAGGTTGTCCCTGATGAAATAAATAGGGAGGATCCACATGGTGACAGCCAAGAAATGCTGTCTCGTTCTCTAGGAAGGGCTGATAGTGGCTCGAAAGTTGATGGTTCTGCAAAGGCAGAGTCTGTTGAAAGTGGTGAAAAGATAAGCCAAAGCTGCAAGTTAGTTCCAGATAACACTGCTCATCCTTCTCTTTCCTGCAATGCTAATGTCTATGGTCATGAAACTCCCAAGAAAGGGGTAAAAGATGCTGGAAAATCATCTTCAATAAACAACTTTCCATACCCATACCCAGAGTCAGATTATGCCGTTGCAAATGGGATAGGTAAATTCTGTGTGCCTTACTTGGTTGATTGA
Protein:  
MREEVISSGGTIDPTPAASSAGASSPAVPNVGSIDWSGHGQNSKAVSQSCVGSQAPWTSLSTSAGGSALGSSKTSCRPWERGDLLRRLATFKPMNWFGKPKLASSLACAQRGWMNIDVDKIACETCGACLHFASSPSWPASEGKIVSEAEDAGLVFSKQLDVGHKVACPWRGNSCPESLVQFPPTPQSALIAGYKDRCDGLLQFQSLPVIAASALEHMRVSRGPQVDRLLSQLQNYMTEFESRSENIPEFDNPRDGAFCLYYRSQKLISLCGWEPRWLPNIQDCEEHSAQSARNGCSFGPSTAQLHLSQDPGPSKNALAASAKDTGKNKLLVVESRSELRSPLLDCSLCGATVRILDFLTVPRPARVGPNNIDIPDTSKKMGLTRGVSAASGISGWVAADDPDKETEDRDEVGTNDERKLMQKSDVDLNLTMAGGLSVNQLGRPTTSRNMNDADMGRDLMIGQPAGSEVGDRAASYESRGPSSRKRSLEIGASSDDRPQLRLQQADSVEGTVIDRDGDEVTDGRQYSAGPSKRARDSDIFDTNCSYPRDSSDAGPSHSMGFETHADGNRFALFRQGSDHVFGNPSARDSTRASSVIAMDTVCHSADDDSMESVENYPGDVDDIHFPSSSTYGHLDMNDTSELNNSNQAQQSICFQPAAEALPGEMGISSTNDGEEIFNAETVTAQARDGLSFGISGGSVGMCASHEAEIHGADVSVHRTDSVVGDVEPRIEDAENQGQTGESAPDPGLMDEVVPDEINREDPHGDSQEMLSRSLGRADSGSKVDGSAKAESVESGEKISQSCKLVPDNTAHPSLSCNANVYGHETPKKGVKDAGKSSSINNFPYPYPESDYAVANGIGKFCVPYLVD